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Species belonging to selected taxon:

Cynodon dactylon, Eragrostis curvula, Panicum virgatum, Saccharum hybrid cultivar CoS 767, Saccharum hybrid cultivar SP70-1143, Saccharum officinarum, Sorghum propinquum, Cenchrus ciliaris, Zea mays, Sorghum bicolor



ABOUT THIS RECORD

ID: MNEST003637
species: Zea mays
miRNA family: miR398a
source: miRNEST

Taxonomy by NCBI:
Zea mays Zea Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGGGCGAACTGAGAACACATA

miRNA*
 TGTGTTCTCAGGTCGCCCCCG

mismatches: 3
bulges: 0
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pre-miRNA
 CGCGATGCAAGGCAGTTCCGGCGGGGGCGAACTGAGAACACATAAGACGAGATTGCTCGCCTCGCGGTACGGTTCGTGCTGGCCTGGACCACCGTCGTCG
CCGTTCATCTTGTATGCATAATGCTGCATGTGTTCTCAGGTCGCCCCCGCAAGGCCTTCCTTGCTACTG

dot-bracket secondary structure
......((((((.((..((.((((((((((.(((((((((((....(((((((.((..((..((((((..((((((........)))))))))).))..)
).))..))))))).((((......))))))))))))))).))))))))))..)).)).)))))).....


SIMILARITIES
miRBase zma-MIR398a: 5e-44

PMRD zma-miR398b: 5e-44

microPC miR398: 0.000008		UniProt no hits

RFAM MIR398: 0.0000006		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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